PCI: imx6: Fix bugs in PCIe startup code

LTSSM shouldn't be set once in assert_core_reset().  Move peripheral reset
just before LTSSM start.

Signed-off-by: Richard Zhu <r65037@freescale.com>
Signed-off-by: Bjorn Helgaas <bhelgaas@google.com>
Acked-by: Shawn Guo <shawn.guo@linaro.org>
Cc: Frank Li <lznuaa@gmail.com>
Cc: Harro Haan <hrhaan@gmail.com>
Cc: Jingoo Han <jg1.han@samsung.com>
Cc: Mohit KUMAR <Mohit.KUMAR@st.com>
Cc: Pratyush Anand <pratyush.anand@st.com>
Cc: Richard Zhu <r65037@freescale.com>
Cc: Sascha Hauer <s.hauer@pengutronix.de>
Cc: Sean Cross <xobs@kosagi.com>
Cc: Siva Reddy Kallam <siva.kallam@samsung.com>
Cc: Srikanth T Shivanand <ts.srikanth@samsung.com>
Cc: Tim Harvey <tharvey@gateworks.com>
Cc: Troy Kisky <troy.kisky@boundarydevices.com>
Cc: Yinghai Lu <yinghai@kernel.org>

drivers/pci/host/pci-imx6.c

@@ -220,18 +220,9 @@ static int imx6_pcie_assert_core_reset(struct pcie_port *pp)
 
 	regmap_update_bits(imx6_pcie->iomuxc_gpr, IOMUXC_GPR1,
 			IMX6Q_GPR1_PCIE_TEST_PD, 1 << 18);
-	regmap_update_bits(imx6_pcie->iomuxc_gpr, IOMUXC_GPR12,
-			IMX6Q_GPR12_PCIE_CTL_2, 1 << 10);
 	regmap_update_bits(imx6_pcie->iomuxc_gpr, IOMUXC_GPR1,
 			IMX6Q_GPR1_PCIE_REF_CLK_EN, 0 << 16);
 
-	/* Some boards don't have PCIe reset GPIO. */
-	if (gpio_is_valid(imx6_pcie->reset_gpio)) {
-		gpio_set_value(imx6_pcie->reset_gpio, 0);
-		msleep(100);
-		gpio_set_value(imx6_pcie->reset_gpio, 1);
-	}
-
 	return 0;
 }
 
@@ -275,6 +266,12 @@ static int imx6_pcie_deassert_core_reset(struct pcie_port *pp)
 	/* allow the clocks to stabilize */
 	usleep_range(200, 500);
 
+	/* Some boards don't have PCIe reset GPIO. */
+	if (gpio_is_valid(imx6_pcie->reset_gpio)) {
+		gpio_set_value(imx6_pcie->reset_gpio, 0);
+		msleep(100);
+		gpio_set_value(imx6_pcie->reset_gpio, 1);
+	}
 	return 0;
 
 err_pcie_axi: